Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
O00370 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
O00370 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.01□□□□□ -0.17
O00370 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
O00370 OR10N1P-201ENST00000392758 869 ntBASIC14.01□□□□□ -0.17
O00370 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC14.01□□□□□ -0.17
O00370 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 AL080243.1-201ENST00000423293 1060 ntBASIC14.01□□□□□ -0.17
O00370 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.01□□□□□ -0.17
O00370 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.01□□□□□ -0.17
O00370 SRP19-206ENST00000515463 660 ntTSL 3 BASIC14.01□□□□□ -0.17
O00370 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.01□□□□□ -0.17
O00370 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.01□□□□□ -0.17
O00370 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.01□□□□□ -0.17
O00370 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC14.01□□□□□ -0.17
O00370 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
O00370 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.01□□□□□ -0.17
O00370 FRG2EP-201ENST00000634243 835 ntBASIC14.01□□□□□ -0.17
O00370 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.01□□□□□ -0.17
O00370 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC14.01□□□□□ -0.17
O00370 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 CTAGE13P-201ENST00000416709 2446 ntBASIC14.01□□□□□ -0.17
O00370 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
O00370 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
O00370 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC14.01□□□□□ -0.17
O00370 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
O00370 AC092028.1-202ENST00000641483 3547 ntBASIC14.01□□□□□ -0.17
O00370 AC092028.1-201ENST00000641781 3540 ntBASIC14.01□□□□□ -0.17
O00370 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 PES1-205ENST00000405677 2708 ntTSL 2 BASIC14□□□□□ -0.17
O00370 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC14□□□□□ -0.17
O00370 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
O00370 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
O00370 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14□□□□□ -0.17
O00370 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
O00370 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14□□□□□ -0.17
O00370 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
O00370 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 AC097065.1-201ENST00000425737 517 ntBASIC14□□□□□ -0.17
O00370 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14□□□□□ -0.17
O00370 RPL13AP19-201ENST00000434320 584 ntBASIC14□□□□□ -0.17
O00370 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14□□□□□ -0.17
O00370 HIST1H2APS2-201ENST00000454426 370 ntBASIC14□□□□□ -0.17
O00370 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
O00370 AC092862.1-201ENST00000541534 533 ntBASIC14□□□□□ -0.17
O00370 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14□□□□□ -0.17
O00370 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC14□□□□□ -0.17
O00370 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14□□□□□ -0.17
O00370 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC14□□□□□ -0.17
O00370 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
O00370 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
O00370 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC14□□□□□ -0.17
O00370 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC14□□□□□ -0.17
O00370 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
O00370 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14□□□□□ -0.17
O00370 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC14□□□□□ -0.17
O00370 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC14□□□□□ -0.17
O00370 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
O00370 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
O00370 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC14□□□□□ -0.17
O00370 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
O00370 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
O00370 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
O00370 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
O00370 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC13.99□□□□□ -0.17
O00370 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
O00370 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.99□□□□□ -0.17
O00370 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
O00370 AC120114.4-201ENST00000623731 2194 ntBASIC13.99□□□□□ -0.17
O00370 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC13.99□□□□□ -0.17
O00370 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms