Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 NAT9-222ENST00000583476 583 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 CLPP-205ENST00000596605 646 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 TRMT112P6-201ENST00000599234 372 ntBASIC10.71□□□□□ -0.69
RAB40CQ96S21 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB40CQ96S21 AL139823.1-201ENST00000641871 1225 ntBASIC10.71□□□□□ -0.69
RAB40CQ96S21 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
RAB40CQ96S21 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
RAB40CQ96S21 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
RAB40CQ96S21 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 RN7SKP214-201ENST00000364208 315 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 ACTBP11-201ENST00000436287 1126 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 ORAOV1P1-201ENST00000503108 395 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AL118558.3-201ENST00000607414 1079 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 AL022328.3-201ENST00000607943 679 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AL008638.5-201ENST00000623814 1298 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC011491.1-203ENST00000637688 543 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RAB40CQ96S21 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
RAB40CQ96S21 AC015909.3-201ENST00000572855 1794 ntBASIC10.7□□□□□ -0.7
RAB40CQ96S21 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC018735.1-201ENST00000437208 1502 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ZDHHC8P1-202ENST00000418264 1403 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms