Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 CFL1P6-201ENST00000400899 494 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 HLA-W-207ENST00000439514 771 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 RPL35P1-201ENST00000450819 370 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AP000533.1-201ENST00000456143 1177 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AC093700.1-201ENST00000503348 717 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AC147876.1-201ENST00000504408 322 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AL590235.1-201ENST00000564650 861 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 PRR20FP-201ENST00000603320 180 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AL022323.5-201ENST00000624101 2059 ntBASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPA3F8WFD2 GHET1-201ENST00000627071 1906 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 BEND3P3-201ENST00000611030 2440 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 KRT18P33-201ENST00000398525 1043 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 RN7SL684P-201ENST00000465665 294 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 BCRP4-201ENST00000506079 804 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 HINT1-204ENST00000506908 681 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC018846.1-201ENST00000568231 183 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC026304.1-201ENST00000597953 561 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 C2orf27AP1-201ENST00000618128 586 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 DGCR9-201ENST00000609630 2415 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms