Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 AC011458.2-201ENST00000603937 207 ntBASIC11.6□□□□□ -0.55
NPIPB4C9JG80 AC006483.2-201ENST00000609813 515 ntBASIC11.6□□□□□ -0.55
NPIPB4C9JG80 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 HLA-C-210ENST00000640219 976 ntBASIC11.6□□□□□ -0.55
NPIPB4C9JG80 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 POM121L7P-201ENST00000329949 2404 ntBASIC11.6□□□□□ -0.55
NPIPB4C9JG80 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.6□□□□□ -0.55
NPIPB4C9JG80 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 AL672207.1-201ENST00000328462 1570 ntBASIC11.59□□□□□ -0.55
NPIPB4C9JG80 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 STK16-203ENST00000409516 895 ntTSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ASLP1-201ENST00000428790 637 ntBASIC11.59□□□□□ -0.55
NPIPB4C9JG80 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 HNRNPA3P12-201ENST00000437410 1063 ntBASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 RNA5SP420-201ENST00000516997 137 ntBASIC11.59□□□□□ -0.55
NPIPB4C9JG80 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 MIR4472-1-201ENST00000584349 80 ntBASIC11.59□□□□□ -0.55
NPIPB4C9JG80 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 URAHP-205ENST00000610227 398 ntBASIC11.59□□□□□ -0.55
NPIPB4C9JG80 AL132780.4-201ENST00000624870 1135 ntBASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 KC6-207ENST00000600644 2311 ntTSL 3 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
NPIPB4C9JG80 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NPIPB4C9JG80 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.58□□□□□ -0.55
NPIPB4C9JG80 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NPIPB4C9JG80 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 AC025538.1-201ENST00000510707 1486 ntBASIC11.58□□□□□ -0.56
NPIPB4C9JG80 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
NPIPB4C9JG80 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms