Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MTHFRP42898 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 FAM183BP-201ENST00000409072 1595 ntBASIC13.79□□□□□ -0.2
MTHFRP42898 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC13.79□□□□□ -0.2
MTHFRP42898 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
MTHFRP42898 MIR193A-201ENST00000384882 88 ntBASIC13.78□□□□□ -0.2
MTHFRP42898 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 AC079325.1-201ENST00000430386 857 ntBASIC13.78□□□□□ -0.2
MTHFRP42898 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
MTHFRP42898 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 HNRNPA1P55-201ENST00000505935 955 ntBASIC13.78□□□□□ -0.2
MTHFRP42898 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
MTHFRP42898 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC13.78□□□□□ -0.2
MTHFRP42898 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC13.78□□□□□ -0.2
MTHFRP42898 CD9-212ENST00000610354 1315 ntTSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.78□□□□□ -0.2
MTHFRP42898 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MTHFRP42898 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MTHFRP42898 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
MTHFRP42898 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
MTHFRP42898 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
MTHFRP42898 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
MTHFRP42898 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
MTHFRP42898 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC13.77□□□□□ -0.21
MTHFRP42898 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 AC104117.1-201ENST00000517817 900 ntBASIC13.77□□□□□ -0.21
MTHFRP42898 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC13.77□□□□□ -0.21
MTHFRP42898 FAM213AP2-201ENST00000521579 683 ntBASIC13.77□□□□□ -0.21
MTHFRP42898 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC13.77□□□□□ -0.21
MTHFRP42898 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC13.77□□□□□ -0.21
MTHFRP42898 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 AC108673.2-201ENST00000608909 565 ntBASIC13.77□□□□□ -0.21
MTHFRP42898 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms