Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHL1O00533 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 PEBP1P3-201ENST00000455475 548 ntBASIC16.68■□□□□ 0.26
CHL1O00533 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC16.68■□□□□ 0.26
CHL1O00533 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 Z93930.2-203ENST00000585003 516 ntBASIC16.68■□□□□ 0.26
CHL1O00533 AC090950.1-202ENST00000605733 644 ntBASIC16.68■□□□□ 0.26
CHL1O00533 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 AL050341.2-201ENST00000567508 1541 ntBASIC16.68■□□□□ 0.26
CHL1O00533 AC011700.1-201ENST00000610409 2627 ntBASIC16.68■□□□□ 0.26
CHL1O00533 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 NPTN-IT1-201ENST00000628401 2283 ntBASIC16.68■□□□□ 0.26
CHL1O00533 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 PCDHB18P-202ENST00000526308 3197 ntBASIC16.68■□□□□ 0.26
CHL1O00533 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CHL1O00533 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
CHL1O00533 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.67■□□□□ 0.26
CHL1O00533 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 FAM90A22P-201ENST00000400142 1395 ntBASIC16.67■□□□□ 0.26
CHL1O00533 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC16.67■□□□□ 0.26
CHL1O00533 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CHL1O00533 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.67■□□□□ 0.26
CHL1O00533 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CHL1O00533 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CHL1O00533 SNORD88B-201ENST00000408454 91 ntBASIC16.67■□□□□ 0.26
CHL1O00533 NOS2P3-201ENST00000411468 867 ntBASIC16.67■□□□□ 0.26
CHL1O00533 NOS2P2-201ENST00000426269 867 ntBASIC16.67■□□□□ 0.26
CHL1O00533 AC092910.2-201ENST00000491262 348 ntBASIC16.67■□□□□ 0.26
CHL1O00533 AC011431.1-201ENST00000512971 230 ntBASIC16.67■□□□□ 0.26
CHL1O00533 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.67■□□□□ 0.26
CHL1O00533 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC16.67■□□□□ 0.26
CHL1O00533 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC16.67■□□□□ 0.26
CHL1O00533 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHL1O00533 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHL1O00533 AC011462.4-201ENST00000616866 449 ntBASIC16.67■□□□□ 0.26
CHL1O00533 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 THEMIS3P-201ENST00000416112 1586 ntBASIC16.67■□□□□ 0.26
CHL1O00533 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHL1O00533 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHL1O00533 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHL1O00533 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHL1O00533 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.66■□□□□ 0.26
CHL1O00533 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHL1O00533 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHL1O00533 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CHL1O00533 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHL1O00533 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHL1O00533 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHL1O00533 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.66■□□□□ 0.26
CHL1O00533 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHL1O00533 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHL1O00533 NAA10-205ENST00000393712 908 ntTSL 5 BASIC16.66■□□□□ 0.26
CHL1O00533 AL357373.1-201ENST00000394974 322 ntBASIC16.66■□□□□ 0.26
CHL1O00533 PGAM1P10-201ENST00000402426 761 ntBASIC16.66■□□□□ 0.26
CHL1O00533 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.66■□□□□ 0.26
CHL1O00533 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHL1O00533 RN7SL47P-201ENST00000488710 299 ntBASIC16.66■□□□□ 0.26
CHL1O00533 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC16.66■□□□□ 0.26
CHL1O00533 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHL1O00533 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC16.66■□□□□ 0.26
CHL1O00533 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms