Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.83■□□□□ 0.93
AP4S1Q9Y587 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP4S1Q9Y587 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
AP4S1Q9Y587 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP4S1Q9Y587 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.83■□□□□ 0.92
AP4S1Q9Y587 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
AP4S1Q9Y587 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP4S1Q9Y587 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.8■□□□□ 0.92
AP4S1Q9Y587 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4S1Q9Y587 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP4S1Q9Y587 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP4S1Q9Y587 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
AP4S1Q9Y587 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
AP4S1Q9Y587 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
AP4S1Q9Y587 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.77■□□□□ 0.91
AP4S1Q9Y587 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP4S1Q9Y587 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms