Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC024257.2-201ENST00000549699 147 ntBASIC23.59■■□□□ 1.37
CISHQ9NSE2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CISHQ9NSE2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.59■■□□□ 1.37
CISHQ9NSE2 AC110285.6-201ENST00000617652 491 ntBASIC23.59■■□□□ 1.37
CISHQ9NSE2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.59■■□□□ 1.37
CISHQ9NSE2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CISHQ9NSE2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CISHQ9NSE2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CISHQ9NSE2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CISHQ9NSE2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CISHQ9NSE2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.58■■□□□ 1.37
CISHQ9NSE2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CISHQ9NSE2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CISHQ9NSE2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.58■■□□□ 1.37
CISHQ9NSE2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CISHQ9NSE2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CISHQ9NSE2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.58■■□□□ 1.37
CISHQ9NSE2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
CISHQ9NSE2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
CISHQ9NSE2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CISHQ9NSE2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
CISHQ9NSE2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CISHQ9NSE2 AC135279.3-201ENST00000610945 1311 ntBASIC23.58■■□□□ 1.36
CISHQ9NSE2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CISHQ9NSE2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.57■■□□□ 1.36
CISHQ9NSE2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CISHQ9NSE2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CISHQ9NSE2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CISHQ9NSE2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CISHQ9NSE2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CISHQ9NSE2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CISHQ9NSE2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.57■■□□□ 1.36
CISHQ9NSE2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.57■■□□□ 1.36
CISHQ9NSE2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CISHQ9NSE2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CISHQ9NSE2 AC133561.1-201ENST00000568600 2415 ntBASIC23.57■■□□□ 1.36
CISHQ9NSE2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.56■■□□□ 1.36
CISHQ9NSE2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CISHQ9NSE2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CISHQ9NSE2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CISHQ9NSE2 PBX2P1-201ENST00000493219 1291 ntBASIC23.56■■□□□ 1.36
CISHQ9NSE2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.56■■□□□ 1.36
CISHQ9NSE2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CISHQ9NSE2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CISHQ9NSE2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CISHQ9NSE2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.56■■□□□ 1.36
CISHQ9NSE2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
CISHQ9NSE2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CISHQ9NSE2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CISHQ9NSE2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.55■■□□□ 1.36
CISHQ9NSE2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.55■■□□□ 1.36
CISHQ9NSE2 MIR4767-201ENST00000582827 78 ntBASIC23.55■■□□□ 1.36
CISHQ9NSE2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CISHQ9NSE2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CISHQ9NSE2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CISHQ9NSE2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CISHQ9NSE2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CISHQ9NSE2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.54■■□□□ 1.36
CISHQ9NSE2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.54■■□□□ 1.36
CISHQ9NSE2 AC106739.1-201ENST00000617035 715 ntBASIC23.54■■□□□ 1.36
CISHQ9NSE2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
CISHQ9NSE2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CISHQ9NSE2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CISHQ9NSE2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.54■■□□□ 1.36
CISHQ9NSE2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CISHQ9NSE2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CISHQ9NSE2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CISHQ9NSE2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 OR2I1P-207ENST00000453522 948 ntBASIC23.53■■□□□ 1.36
CISHQ9NSE2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
CISHQ9NSE2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CISHQ9NSE2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.52■■□□□ 1.36
CISHQ9NSE2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CISHQ9NSE2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.52■■□□□ 1.36
CISHQ9NSE2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CISHQ9NSE2 AL139246.5-201ENST00000606645 996 ntBASIC23.52■■□□□ 1.36
CISHQ9NSE2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CISHQ9NSE2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CISHQ9NSE2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CISHQ9NSE2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CISHQ9NSE2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CISHQ9NSE2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CISHQ9NSE2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CISHQ9NSE2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CISHQ9NSE2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.51■■□□□ 1.35
CISHQ9NSE2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CISHQ9NSE2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.51■■□□□ 1.35
CISHQ9NSE2 AC010525.1-201ENST00000585559 441 ntBASIC23.51■■□□□ 1.35
CISHQ9NSE2 LINC01960-201ENST00000563759 1884 ntBASIC23.51■■□□□ 1.35
CISHQ9NSE2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CISHQ9NSE2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CISHQ9NSE2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CISHQ9NSE2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
CISHQ9NSE2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms