Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 AC087742.1-201ENST00000575880 1738 ntBASIC18.9■□□□□ 0.62
NICN1Q9BSH3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 AL137060.1-201ENST00000618151 2648 ntBASIC18.9■□□□□ 0.62
NICN1Q9BSH3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.9■□□□□ 0.62
NICN1Q9BSH3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NICN1Q9BSH3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.89■□□□□ 0.62
NICN1Q9BSH3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 AC074183.2-201ENST00000623112 922 ntBASIC18.89■□□□□ 0.61
NICN1Q9BSH3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NICN1Q9BSH3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 AC144652.1-201ENST00000609974 1624 ntBASIC18.88■□□□□ 0.61
NICN1Q9BSH3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NICN1Q9BSH3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NICN1Q9BSH3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NICN1Q9BSH3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.86■□□□□ 0.61
NICN1Q9BSH3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.86■□□□□ 0.61
NICN1Q9BSH3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NICN1Q9BSH3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NICN1Q9BSH3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.86■□□□□ 0.61
NICN1Q9BSH3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.86■□□□□ 0.61
NICN1Q9BSH3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NICN1Q9BSH3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 SNX5-217ENST00000606557 1087 ntBASIC18.85■□□□□ 0.61
NICN1Q9BSH3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NICN1Q9BSH3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NICN1Q9BSH3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
NICN1Q9BSH3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NICN1Q9BSH3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NICN1Q9BSH3 TSPY13P-201ENST00000338964 914 ntBASIC18.83■□□□□ 0.6
NICN1Q9BSH3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NICN1Q9BSH3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms