Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TUBGCP6Q96RT7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TUBGCP6Q96RT7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.65■■■□□ 2.18
TUBGCP6Q96RT7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TUBGCP6Q96RT7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.65■■■□□ 2.18
TUBGCP6Q96RT7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 AL499627.2-201ENST00000606283 725 ntBASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 AL050303.2-201ENST00000619798 666 ntBASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TUBGCP6Q96RT7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.64■■■□□ 2.17
TUBGCP6Q96RT7 MIR4651-201ENST00000582622 73 ntBASIC28.64■■■□□ 2.17
TUBGCP6Q96RT7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.64■■■□□ 2.17
TUBGCP6Q96RT7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC28.64■■■□□ 2.17
TUBGCP6Q96RT7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
TUBGCP6Q96RT7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.63■■■□□ 2.17
TUBGCP6Q96RT7 LINC00543-201ENST00000567234 1845 ntBASIC28.63■■■□□ 2.17
TUBGCP6Q96RT7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC28.63■■■□□ 2.17
TUBGCP6Q96RT7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
TUBGCP6Q96RT7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TUBGCP6Q96RT7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TUBGCP6Q96RT7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TUBGCP6Q96RT7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TUBGCP6Q96RT7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TUBGCP6Q96RT7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.61■■■□□ 2.17
TUBGCP6Q96RT7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TUBGCP6Q96RT7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TUBGCP6Q96RT7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.61■■■□□ 2.17
TUBGCP6Q96RT7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.61■■■□□ 2.17
TUBGCP6Q96RT7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 GUSBP6-202ENST00000438529 1198 ntBASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 AC105233.4-201ENST00000642045 216 ntBASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.6■■■□□ 2.17
TUBGCP6Q96RT7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TUBGCP6Q96RT7 LINC01124-201ENST00000409786 2117 ntBASIC28.59■■■□□ 2.17
TUBGCP6Q96RT7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.59■■■□□ 2.17
TUBGCP6Q96RT7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TUBGCP6Q96RT7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TUBGCP6Q96RT7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
TUBGCP6Q96RT7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TUBGCP6Q96RT7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
TUBGCP6Q96RT7 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.58■■■□□ 2.17
TUBGCP6Q96RT7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TUBGCP6Q96RT7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.58■■■□□ 2.17
TUBGCP6Q96RT7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
TUBGCP6Q96RT7 AC142086.2-201ENST00000569753 217 ntBASIC28.57■■■□□ 2.16
TUBGCP6Q96RT7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TUBGCP6Q96RT7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TUBGCP6Q96RT7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TUBGCP6Q96RT7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.57■■■□□ 2.16
TUBGCP6Q96RT7 CD99P1-205ENST00000527459 561 ntBASIC28.57■■■□□ 2.16
TUBGCP6Q96RT7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
TUBGCP6Q96RT7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TUBGCP6Q96RT7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TUBGCP6Q96RT7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
TUBGCP6Q96RT7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TUBGCP6Q96RT7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TUBGCP6Q96RT7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TUBGCP6Q96RT7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.55■■■□□ 2.16
TUBGCP6Q96RT7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.55■■■□□ 2.16
TUBGCP6Q96RT7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TUBGCP6Q96RT7 TSPY20P-201ENST00000450910 630 ntBASIC28.55■■■□□ 2.16
TUBGCP6Q96RT7 SLC7A5P2-201ENST00000553010 536 ntBASIC28.55■■■□□ 2.16
TUBGCP6Q96RT7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TUBGCP6Q96RT7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.54■■■□□ 2.16
TUBGCP6Q96RT7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TUBGCP6Q96RT7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.53■■■□□ 2.16
TUBGCP6Q96RT7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
TUBGCP6Q96RT7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms