Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 MIR4767-201ENST00000582827 78 ntBASIC18.38■□□□□ 0.53
GAFA1Q96PS6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAFA1Q96PS6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 OR2I1P-207ENST00000453522 948 ntBASIC18.37■□□□□ 0.53
GAFA1Q96PS6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 PBX2P1-201ENST00000493219 1291 ntBASIC18.37■□□□□ 0.53
GAFA1Q96PS6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GAFA1Q96PS6 C1orf229-201ENST00000623686 2258 ntBASIC18.37■□□□□ 0.53
GAFA1Q96PS6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.36■□□□□ 0.53
GAFA1Q96PS6 AC106739.1-201ENST00000617035 715 ntBASIC18.36■□□□□ 0.53
GAFA1Q96PS6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 AL139246.5-201ENST00000606645 996 ntBASIC18.35■□□□□ 0.53
GAFA1Q96PS6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAFA1Q96PS6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 AC010525.1-201ENST00000585559 441 ntBASIC18.34■□□□□ 0.53
GAFA1Q96PS6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAFA1Q96PS6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GAFA1Q96PS6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GAFA1Q96PS6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GAFA1Q96PS6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GAFA1Q96PS6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.33■□□□□ 0.53
GAFA1Q96PS6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 SLC47A1P1-202ENST00000449666 945 ntBASIC18.33■□□□□ 0.52
GAFA1Q96PS6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 LINC01960-201ENST00000563759 1884 ntBASIC18.33■□□□□ 0.52
GAFA1Q96PS6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GAFA1Q96PS6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GAFA1Q96PS6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms