Protein–RNA interactions for Protein: Q96JN0

LCOR, Ligand-dependent corepressor, humanhuman

Predicted RBP Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCORQ96JN0 AC004687.1-201ENST00000579003 1625 ntBASIC20.48■□□□□ 0.87
LCORQ96JN0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCORQ96JN0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCORQ96JN0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCORQ96JN0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCORQ96JN0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCORQ96JN0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCORQ96JN0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCORQ96JN0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.47■□□□□ 0.87
LCORQ96JN0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.47■□□□□ 0.87
LCORQ96JN0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.47■□□□□ 0.87
LCORQ96JN0 AC136469.2-201ENST00000623944 1028 ntBASIC20.47■□□□□ 0.87
LCORQ96JN0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.47■□□□□ 0.87
LCORQ96JN0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.47■□□□□ 0.87
LCORQ96JN0 AC135279.3-201ENST00000610945 1311 ntBASIC20.47■□□□□ 0.87
LCORQ96JN0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCORQ96JN0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCORQ96JN0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCORQ96JN0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCORQ96JN0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCORQ96JN0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.46■□□□□ 0.87
LCORQ96JN0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.46■□□□□ 0.87
LCORQ96JN0 AC024257.2-201ENST00000549699 147 ntBASIC20.46■□□□□ 0.87
LCORQ96JN0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCORQ96JN0 AC110285.6-201ENST00000617652 491 ntBASIC20.46■□□□□ 0.87
LCORQ96JN0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.46■□□□□ 0.87
LCORQ96JN0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.46■□□□□ 0.87
LCORQ96JN0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCORQ96JN0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCORQ96JN0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCORQ96JN0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCORQ96JN0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.45■□□□□ 0.86
LCORQ96JN0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCORQ96JN0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCORQ96JN0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LCORQ96JN0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.45■□□□□ 0.86
LCORQ96JN0 PBX2P1-201ENST00000493219 1291 ntBASIC20.45■□□□□ 0.86
LCORQ96JN0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LCORQ96JN0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCORQ96JN0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCORQ96JN0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.45■□□□□ 0.86
LCORQ96JN0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.45■□□□□ 0.86
LCORQ96JN0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCORQ96JN0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LCORQ96JN0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.44■□□□□ 0.86
LCORQ96JN0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCORQ96JN0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCORQ96JN0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.44■□□□□ 0.86
LCORQ96JN0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.44■□□□□ 0.86
LCORQ96JN0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.44■□□□□ 0.86
LCORQ96JN0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.44■□□□□ 0.86
LCORQ96JN0 AL139246.5-201ENST00000606645 996 ntBASIC20.44■□□□□ 0.86
LCORQ96JN0 AC106739.1-201ENST00000617035 715 ntBASIC20.44■□□□□ 0.86
LCORQ96JN0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LCORQ96JN0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.44■□□□□ 0.86
LCORQ96JN0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.44■□□□□ 0.86
LCORQ96JN0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.44■□□□□ 0.86
LCORQ96JN0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.44■□□□□ 0.86
LCORQ96JN0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LCORQ96JN0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LCORQ96JN0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.43■□□□□ 0.86
LCORQ96JN0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
LCORQ96JN0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.43■□□□□ 0.86
LCORQ96JN0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.43■□□□□ 0.86
LCORQ96JN0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.43■□□□□ 0.86
LCORQ96JN0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.43■□□□□ 0.86
LCORQ96JN0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.43■□□□□ 0.86
LCORQ96JN0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.43■□□□□ 0.86
LCORQ96JN0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCORQ96JN0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCORQ96JN0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCORQ96JN0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
LCORQ96JN0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LCORQ96JN0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LCORQ96JN0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LCORQ96JN0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
LCORQ96JN0 MIR4767-201ENST00000582827 78 ntBASIC20.42■□□□□ 0.86
LCORQ96JN0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LCORQ96JN0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCORQ96JN0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LCORQ96JN0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.41■□□□□ 0.86
LCORQ96JN0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCORQ96JN0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
LCORQ96JN0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCORQ96JN0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.41■□□□□ 0.86
LCORQ96JN0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
LCORQ96JN0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCORQ96JN0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LCORQ96JN0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCORQ96JN0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.41■□□□□ 0.86
LCORQ96JN0 C9orf163-202ENST00000624034 2573 ntBASIC20.41■□□□□ 0.86
LCORQ96JN0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms