Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 AC091305.1-201ENST00000479476 895 ntBASIC18.78■□□□□ 0.6
RAB39BQ96DA2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 AF213884.3-201ENST00000563833 479 ntBASIC18.78■□□□□ 0.6
RAB39BQ96DA2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB39BQ96DA2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB39BQ96DA2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 MIR939-201ENST00000401314 82 ntBASIC18.76■□□□□ 0.59
RAB39BQ96DA2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 AP001330.3-201ENST00000520123 633 ntBASIC18.76■□□□□ 0.59
RAB39BQ96DA2 AC027682.1-201ENST00000562846 899 ntBASIC18.76■□□□□ 0.59
RAB39BQ96DA2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB39BQ96DA2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 AC136469.2-201ENST00000623944 1028 ntBASIC18.75■□□□□ 0.59
RAB39BQ96DA2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB39BQ96DA2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 AL136967.2-201ENST00000623968 743 ntBASIC18.74■□□□□ 0.59
RAB39BQ96DA2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB39BQ96DA2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms