Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.39■■□□□ 1.33
UBA3Q8TBC4 MIR4767-201ENST00000582827 78 ntBASIC23.39■■□□□ 1.33
UBA3Q8TBC4 AL139246.5-201ENST00000606645 996 ntBASIC23.39■■□□□ 1.33
UBA3Q8TBC4 AC136469.2-201ENST00000623944 1028 ntBASIC23.39■■□□□ 1.33
UBA3Q8TBC4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.39■■□□□ 1.33
UBA3Q8TBC4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
UBA3Q8TBC4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
UBA3Q8TBC4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
UBA3Q8TBC4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.39■■□□□ 1.33
UBA3Q8TBC4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 AC106739.1-201ENST00000617035 715 ntBASIC23.38■■□□□ 1.33
UBA3Q8TBC4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.38■■□□□ 1.33
UBA3Q8TBC4 C1orf229-201ENST00000623686 2258 ntBASIC23.38■■□□□ 1.33
UBA3Q8TBC4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.37■■□□□ 1.33
UBA3Q8TBC4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 AC068473.5-201ENST00000616428 2072 ntBASIC23.36■■□□□ 1.33
UBA3Q8TBC4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
UBA3Q8TBC4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 AC010525.1-201ENST00000585559 441 ntBASIC23.35■■□□□ 1.33
UBA3Q8TBC4 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.35■■□□□ 1.33
UBA3Q8TBC4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
UBA3Q8TBC4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBA3Q8TBC4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBA3Q8TBC4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
UBA3Q8TBC4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBA3Q8TBC4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
UBA3Q8TBC4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
UBA3Q8TBC4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.33■■□□□ 1.33
UBA3Q8TBC4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
UBA3Q8TBC4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
UBA3Q8TBC4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
UBA3Q8TBC4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.32■■□□□ 1.32
UBA3Q8TBC4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBA3Q8TBC4 AC133561.1-201ENST00000568600 2415 ntBASIC23.32■■□□□ 1.32
UBA3Q8TBC4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.32■■□□□ 1.32
UBA3Q8TBC4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBA3Q8TBC4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
UBA3Q8TBC4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
UBA3Q8TBC4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBA3Q8TBC4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
UBA3Q8TBC4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.3■■□□□ 1.32
UBA3Q8TBC4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms