Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 AL139246.5-201ENST00000606645 996 ntBASIC22.53■■□□□ 1.2
PAF1Q8N7H5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.52■■□□□ 1.2
PAF1Q8N7H5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PAF1Q8N7H5 AC135279.3-201ENST00000610945 1311 ntBASIC22.52■■□□□ 1.2
PAF1Q8N7H5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 SERBP1P1-201ENST00000396021 1160 ntBASIC22.51■■□□□ 1.19
PAF1Q8N7H5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PAF1Q8N7H5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
PAF1Q8N7H5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.5■■□□□ 1.19
PAF1Q8N7H5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PAF1Q8N7H5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PAF1Q8N7H5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PAF1Q8N7H5 AC110285.6-201ENST00000617652 491 ntBASIC22.5■■□□□ 1.19
PAF1Q8N7H5 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.5■■□□□ 1.19
PAF1Q8N7H5 AL353803.4-201ENST00000565882 1934 ntBASIC22.5■■□□□ 1.19
PAF1Q8N7H5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.5■■□□□ 1.19
PAF1Q8N7H5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 AC024257.2-201ENST00000549699 147 ntBASIC22.49■■□□□ 1.19
PAF1Q8N7H5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.49■■□□□ 1.19
PAF1Q8N7H5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PAF1Q8N7H5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 DUX4L4-201ENST00000566884 1269 ntBASIC22.47■■□□□ 1.19
PAF1Q8N7H5 MIR3181-201ENST00000578512 73 ntBASIC22.47■■□□□ 1.19
PAF1Q8N7H5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PAF1Q8N7H5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PAF1Q8N7H5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms