Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 AC099791.1-201ENST00000416440 715 ntBASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 MIR5787-201ENST00000611784 55 ntBASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.73■□□□□ 0.43
KLHDC1Q8N7A1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHDC1Q8N7A1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 MIR3181-201ENST00000578512 73 ntBASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KLHDC1Q8N7A1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHDC1Q8N7A1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KLHDC1Q8N7A1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 pRNA.6-201ENST00000610482 90 ntBASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 pRNA.5-201ENST00000612139 90 ntBASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 AC092666.2-201ENST00000613287 246 ntBASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 pRNA.11-201ENST00000618423 90 ntBASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 pRNA.13-201ENST00000619112 90 ntBASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHDC1Q8N7A1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 AC233992.3-201ENST00000607491 485 ntBASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KLHDC1Q8N7A1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms