Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST3Q8N1M1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.44■□□□□ 0.86
BEST3Q8N1M1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST3Q8N1M1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.43■□□□□ 0.86
BEST3Q8N1M1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
BEST3Q8N1M1 AC012676.1-201ENST00000574705 1949 ntBASIC20.43■□□□□ 0.86
BEST3Q8N1M1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.42■□□□□ 0.86
BEST3Q8N1M1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST3Q8N1M1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 AC092666.2-201ENST00000613287 246 ntBASIC20.4■□□□□ 0.86
BEST3Q8N1M1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
BEST3Q8N1M1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BEST3Q8N1M1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BEST3Q8N1M1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BEST3Q8N1M1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
BEST3Q8N1M1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.39■□□□□ 0.86
BEST3Q8N1M1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST3Q8N1M1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
BEST3Q8N1M1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 AL353803.4-201ENST00000565882 1934 ntBASIC20.37■□□□□ 0.85
BEST3Q8N1M1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 MIR572-201ENST00000384983 95 ntBASIC20.37■□□□□ 0.85
BEST3Q8N1M1 AC104564.3-201ENST00000582367 638 ntBASIC20.37■□□□□ 0.85
BEST3Q8N1M1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST3Q8N1M1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms