Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.18■■□□□ 1.14
LYSMD3Q7Z3D4 AC011298.3-201ENST00000615796 283 ntBASIC22.18■■□□□ 1.14
LYSMD3Q7Z3D4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LYSMD3Q7Z3D4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 AC135279.3-201ENST00000610945 1311 ntBASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 MIR638-201ENST00000385237 100 ntBASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LYSMD3Q7Z3D4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 PBX2P1-201ENST00000493219 1291 ntBASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 AC136469.2-201ENST00000623944 1028 ntBASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LYSMD3Q7Z3D4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
LYSMD3Q7Z3D4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.14■■□□□ 1.14
LYSMD3Q7Z3D4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
LYSMD3Q7Z3D4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
LYSMD3Q7Z3D4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
LYSMD3Q7Z3D4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.14■■□□□ 1.14
LYSMD3Q7Z3D4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LYSMD3Q7Z3D4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
LYSMD3Q7Z3D4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 MIR4767-201ENST00000582827 78 ntBASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 AC106739.1-201ENST00000617035 715 ntBASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.14■■□□□ 1.13
LYSMD3Q7Z3D4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LYSMD3Q7Z3D4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LYSMD3Q7Z3D4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
LYSMD3Q7Z3D4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.13■■□□□ 1.13
LYSMD3Q7Z3D4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
LYSMD3Q7Z3D4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.13■■□□□ 1.13
LYSMD3Q7Z3D4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
LYSMD3Q7Z3D4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 AC133561.4-201ENST00000566112 224 ntBASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
LYSMD3Q7Z3D4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD3Q7Z3D4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD3Q7Z3D4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.11■■□□□ 1.13
LYSMD3Q7Z3D4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD3Q7Z3D4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD3Q7Z3D4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD3Q7Z3D4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms