Protein–RNA interactions for Protein: Q7RTT6

SSX6, Putative protein SSX6, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6Q7RTT6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 SNX5-217ENST00000606557 1087 ntBASIC19.65■□□□□ 0.74
SSX6Q7RTT6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX6Q7RTT6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSX6Q7RTT6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SSX6Q7RTT6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSX6Q7RTT6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX6Q7RTT6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.64■□□□□ 0.73
SSX6Q7RTT6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.64■□□□□ 0.73
SSX6Q7RTT6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.64■□□□□ 0.73
SSX6Q7RTT6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.64■□□□□ 0.73
SSX6Q7RTT6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.64■□□□□ 0.73
SSX6Q7RTT6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSX6Q7RTT6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 TSPY13P-201ENST00000338964 914 ntBASIC19.63■□□□□ 0.73
SSX6Q7RTT6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX6Q7RTT6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX6Q7RTT6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.61■□□□□ 0.73
SSX6Q7RTT6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSX6Q7RTT6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 MIR4508-201ENST00000584178 70 ntBASIC19.6■□□□□ 0.73
SSX6Q7RTT6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSX6Q7RTT6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 AC103834.1-201ENST00000520383 144 ntBASIC19.59■□□□□ 0.73
SSX6Q7RTT6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SSX6Q7RTT6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.58■□□□□ 0.73
SSX6Q7RTT6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSX6Q7RTT6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX6Q7RTT6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX6Q7RTT6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms