Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX8Q7RTT4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 AC010141.3-201ENST00000456659 717 ntBASIC19.12■□□□□ 0.65
SSX8Q7RTT4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.12■□□□□ 0.65
SSX8Q7RTT4 AL031602.1-201ENST00000633169 911 ntBASIC19.12■□□□□ 0.65
SSX8Q7RTT4 ABCB10P4-201ENST00000566803 2184 ntBASIC19.12■□□□□ 0.65
SSX8Q7RTT4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 AC004687.1-201ENST00000579003 1625 ntBASIC19.11■□□□□ 0.65
SSX8Q7RTT4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.11■□□□□ 0.65
SSX8Q7RTT4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 AC034268.1-201ENST00000441047 882 ntBASIC19.1■□□□□ 0.65
SSX8Q7RTT4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.1■□□□□ 0.65
SSX8Q7RTT4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 AC104564.3-201ENST00000582367 638 ntBASIC19.09■□□□□ 0.65
SSX8Q7RTT4 AC105233.4-201ENST00000642045 216 ntBASIC19.09■□□□□ 0.65
SSX8Q7RTT4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSX8Q7RTT4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SSX8Q7RTT4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SSX8Q7RTT4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SSX8Q7RTT4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.08■□□□□ 0.65
SSX8Q7RTT4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.08■□□□□ 0.65
SSX8Q7RTT4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSX8Q7RTT4 LINC02228-203ENST00000641970 1355 ntBASIC19.07■□□□□ 0.64
SSX8Q7RTT4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
SSX8Q7RTT4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 ANOS2P-203ENST00000472227 1816 ntBASIC19.06■□□□□ 0.64
SSX8Q7RTT4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
SSX8Q7RTT4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms