Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HLA-DQA1Q5Y7H0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC136469.2-201ENST00000623944 1028 ntBASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC004687.1-201ENST00000579003 1625 ntBASIC20.53■□□□□ 0.88
HLA-DQA1Q5Y7H0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 AC106739.1-201ENST00000617035 715 ntBASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
HLA-DQA1Q5Y7H0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQA1Q5Y7H0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 MIR4767-201ENST00000582827 78 ntBASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQA1Q5Y7H0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQA1Q5Y7H0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DQA1Q5Y7H0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQA1Q5Y7H0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DQA1Q5Y7H0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA1Q5Y7H0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA1Q5Y7H0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQA1Q5Y7H0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HLA-DQA1Q5Y7H0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DQA1Q5Y7H0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms