Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 MIR6084-201ENST00000622012 110 ntBASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEF17Q5VTA0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRAMEF17Q5VTA0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 AL031602.1-201ENST00000633169 911 ntBASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF17Q5VTA0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 NME4-202ENST00000382940 766 ntTSL 3 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF17Q5VTA0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 MIR572-201ENST00000384983 95 ntBASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 AL162430.1-201ENST00000480705 870 ntBASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 AC093323.1-202ENST00000635031 2045 ntBASIC20.99■□□□□ 0.95
PRAMEF17Q5VTA0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF17Q5VTA0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF17Q5VTA0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 ANOS2P-203ENST00000472227 1816 ntBASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.96■□□□□ 0.95
PRAMEF17Q5VTA0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms