Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01554Q52M75 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 WHAMMP3-201ENST00000611636 1609 ntBASIC11.03□□□□□ -0.64
LINC01554Q52M75 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 AC142472.1-201ENST00000612013 1741 ntBASIC11.03□□□□□ -0.64
LINC01554Q52M75 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01554Q52M75 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01554Q52M75 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC01554Q52M75 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC01554Q52M75 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LINC01554Q52M75 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01554Q52M75 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01554Q52M75 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01554Q52M75 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
LINC01554Q52M75 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01554Q52M75 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
LINC01554Q52M75 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC01554Q52M75 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC01554Q52M75 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01554Q52M75 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01554Q52M75 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC01554Q52M75 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC11□□□□□ -0.65
LINC01554Q52M75 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC11□□□□□ -0.65
LINC01554Q52M75 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC01554Q52M75 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC01554Q52M75 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01554Q52M75 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms