Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 AC106739.1-201ENST00000617035 715 ntBASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 AC110285.6-201ENST00000617652 491 ntBASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D28Q2M2D7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
TBC1D28Q2M2D7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TBC1D28Q2M2D7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TBC1D28Q2M2D7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 MIR4767-201ENST00000582827 78 ntBASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D28Q2M2D7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D28Q2M2D7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 OR2I1P-207ENST00000453522 948 ntBASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.12■□□□□ 0.65
TBC1D28Q2M2D7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D28Q2M2D7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.1■□□□□ 0.65
TBC1D28Q2M2D7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 EDA-201ENST00000338901 1233 ntBASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms