Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPEP62304 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPEP62304 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPEP62304 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRPEP62304 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNRPEP62304 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPEP62304 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPEP62304 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPEP62304 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPEP62304 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPEP62304 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.06■□□□□ 0.32
SNRPEP62304 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPEP62304 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.06■□□□□ 0.32
SNRPEP62304 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRPEP62304 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPEP62304 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRPEP62304 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
SNRPEP62304 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPEP62304 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 AL158211.5-201ENST00000623583 2518 ntBASIC17.05■□□□□ 0.32
SNRPEP62304 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPEP62304 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRPEP62304 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPEP62304 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPEP62304 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SNRPEP62304 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SNRPEP62304 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRPEP62304 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRPEP62304 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPEP62304 HLA-L-211ENST00000482052 1765 ntBASIC17.04■□□□□ 0.32
SNRPEP62304 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SNRPEP62304 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SNRPEP62304 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
SNRPEP62304 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.03■□□□□ 0.32
SNRPEP62304 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SNRPEP62304 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.03■□□□□ 0.32
SNRPEP62304 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPEP62304 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNRPEP62304 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNRPEP62304 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SNRPEP62304 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.02■□□□□ 0.32
SNRPEP62304 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNRPEP62304 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SNRPEP62304 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNRPEP62304 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNRPEP62304 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNRPEP62304 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNRPEP62304 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNRPEP62304 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.02■□□□□ 0.31
SNRPEP62304 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SNRPEP62304 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNRPEP62304 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNRPEP62304 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.02■□□□□ 0.31
SNRPEP62304 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRPEP62304 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SNRPEP62304 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SNRPEP62304 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRPEP62304 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRPEP62304 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.01■□□□□ 0.31
SNRPEP62304 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRPEP62304 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRPEP62304 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SNRPEP62304 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRPEP62304 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRPEP62304 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
SNRPEP62304 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SNRPEP62304 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SNRPEP62304 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SNRPEP62304 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
SNRPEP62304 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SNRPEP62304 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17■□□□□ 0.31
SNRPEP62304 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17■□□□□ 0.31
SNRPEP62304 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNRPEP62304 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17■□□□□ 0.31
SNRPEP62304 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SNRPEP62304 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms