Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PER3P56645 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PER3P56645 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.25■□□□□ 0.83
PER3P56645 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PER3P56645 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PER3P56645 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PER3P56645 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.25■□□□□ 0.83
PER3P56645 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PER3P56645 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PER3P56645 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PER3P56645 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PER3P56645 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PER3P56645 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PER3P56645 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.24■□□□□ 0.83
PER3P56645 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PER3P56645 AL358852.1-201ENST00000623174 1268 ntBASIC20.24■□□□□ 0.83
PER3P56645 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.24■□□□□ 0.83
PER3P56645 DUSP8P5-201ENST00000422884 1815 ntBASIC20.24■□□□□ 0.83
PER3P56645 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.24■□□□□ 0.83
PER3P56645 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PER3P56645 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PER3P56645 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.24■□□□□ 0.83
PER3P56645 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.24■□□□□ 0.83
PER3P56645 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
PER3P56645 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PER3P56645 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PER3P56645 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PER3P56645 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PER3P56645 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PER3P56645 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PER3P56645 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PER3P56645 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PER3P56645 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PER3P56645 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PER3P56645 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PER3P56645 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PER3P56645 ID1-201ENST00000376105 1233 ntBASIC20.22■□□□□ 0.83
PER3P56645 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PER3P56645 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.22■□□□□ 0.83
PER3P56645 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.22■□□□□ 0.83
PER3P56645 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.22■□□□□ 0.83
PER3P56645 MIR3181-201ENST00000578512 73 ntBASIC20.22■□□□□ 0.83
PER3P56645 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PER3P56645 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PER3P56645 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PER3P56645 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PER3P56645 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PER3P56645 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PER3P56645 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PER3P56645 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PER3P56645 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.21■□□□□ 0.83
PER3P56645 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PER3P56645 AC123595.1-201ENST00000440769 1046 ntBASIC20.21■□□□□ 0.83
PER3P56645 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.21■□□□□ 0.83
PER3P56645 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.21■□□□□ 0.83
PER3P56645 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.21■□□□□ 0.83
PER3P56645 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PER3P56645 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PER3P56645 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PER3P56645 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PER3P56645 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.21■□□□□ 0.83
PER3P56645 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PER3P56645 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PER3P56645 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PER3P56645 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PER3P56645 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.2■□□□□ 0.82
PER3P56645 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.2■□□□□ 0.82
PER3P56645 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.2■□□□□ 0.82
PER3P56645 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.2■□□□□ 0.82
PER3P56645 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PER3P56645 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PER3P56645 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PER3P56645 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PER3P56645 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PER3P56645 ALDH1A3-203ENST00000557963 1670 ntBASIC20.19■□□□□ 0.82
PER3P56645 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PER3P56645 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.19■□□□□ 0.82
PER3P56645 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PER3P56645 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.19■□□□□ 0.82
PER3P56645 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PER3P56645 AC027612.3-201ENST00000413684 1047 ntBASIC20.19■□□□□ 0.82
PER3P56645 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PER3P56645 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PER3P56645 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.19■□□□□ 0.82
PER3P56645 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.19■□□□□ 0.82
PER3P56645 TSPY26P-201ENST00000476365 1326 ntBASIC20.19■□□□□ 0.82
PER3P56645 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.19■□□□□ 0.82
PER3P56645 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PER3P56645 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PER3P56645 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PER3P56645 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PER3P56645 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PER3P56645 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.18■□□□□ 0.82
PER3P56645 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PER3P56645 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PER3P56645 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PER3P56645 AC004911.1-201ENST00000416316 871 ntBASIC20.18■□□□□ 0.82
PER3P56645 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.18■□□□□ 0.82
PER3P56645 AC006455.2-201ENST00000429931 906 ntBASIC20.18■□□□□ 0.82
PER3P56645 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms