Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.43■■□□□ 1.02
PDX1P52945 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.43■■□□□ 1.02
PDX1P52945 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.43■■□□□ 1.02
PDX1P52945 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PDX1P52945 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDX1P52945 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.43■■□□□ 1.02
PDX1P52945 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDX1P52945 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.43■■□□□ 1.02
PDX1P52945 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDX1P52945 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDX1P52945 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDX1P52945 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDX1P52945 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDX1P52945 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDX1P52945 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PDX1P52945 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PDX1P52945 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDX1P52945 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.42■■□□□ 1.02
PDX1P52945 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PDX1P52945 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDX1P52945 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDX1P52945 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDX1P52945 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDX1P52945 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDX1P52945 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDX1P52945 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PDX1P52945 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDX1P52945 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.41■■□□□ 1.02
PDX1P52945 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.41■■□□□ 1.02
PDX1P52945 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.41■■□□□ 1.02
PDX1P52945 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.41■■□□□ 1.02
PDX1P52945 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.41■■□□□ 1.02
PDX1P52945 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDX1P52945 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PDX1P52945 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.4■■□□□ 1.02
PDX1P52945 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.4■■□□□ 1.02
PDX1P52945 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.4■■□□□ 1.02
PDX1P52945 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 DUX4L4-201ENST00000566884 1269 ntBASIC21.4■■□□□ 1.02
PDX1P52945 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.4■■□□□ 1.02
PDX1P52945 TERF1P2-201ENST00000583350 1212 ntBASIC21.4■■□□□ 1.02
PDX1P52945 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDX1P52945 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PDX1P52945 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDX1P52945 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDX1P52945 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDX1P52945 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.39■■□□□ 1.01
PDX1P52945 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDX1P52945 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDX1P52945 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDX1P52945 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.39■■□□□ 1.01
PDX1P52945 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PDX1P52945 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PDX1P52945 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDX1P52945 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDX1P52945 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDX1P52945 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.39■■□□□ 1.01
PDX1P52945 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.39■■□□□ 1.01
PDX1P52945 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.38■■□□□ 1.01
PDX1P52945 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.38■■□□□ 1.01
PDX1P52945 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDX1P52945 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.38■■□□□ 1.01
PDX1P52945 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PDX1P52945 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 AC004911.1-201ENST00000416316 871 ntBASIC21.38■■□□□ 1.01
PDX1P52945 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 KRT18P14-201ENST00000534205 1250 ntBASIC21.38■■□□□ 1.01
PDX1P52945 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
PDX1P52945 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDX1P52945 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PDX1P52945 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDX1P52945 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.37■■□□□ 1.01
PDX1P52945 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.37■■□□□ 1.01
PDX1P52945 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDX1P52945 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.37■■□□□ 1.01
PDX1P52945 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDX1P52945 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.37■■□□□ 1.01
PDX1P52945 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDX1P52945 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDX1P52945 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDX1P52945 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
PDX1P52945 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.36■■□□□ 1.01
PDX1P52945 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PDX1P52945 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDX1P52945 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.36■■□□□ 1.01
PDX1P52945 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDX1P52945 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms