Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.92■□□□□ 0.94
RPL3P39023 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.92■□□□□ 0.94
RPL3P39023 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RPL3P39023 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL3P39023 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL3P39023 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RPL3P39023 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.91■□□□□ 0.94
RPL3P39023 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RPL3P39023 AC087742.1-201ENST00000575880 1738 ntBASIC20.91■□□□□ 0.94
RPL3P39023 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPL3P39023 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
RPL3P39023 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.9■□□□□ 0.94
RPL3P39023 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPL3P39023 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RPL3P39023 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RPL3P39023 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPL3P39023 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPL3P39023 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
RPL3P39023 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPL3P39023 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPL3P39023 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPL3P39023 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RPL3P39023 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPL3P39023 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPL3P39023 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPL3P39023 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPL3P39023 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPL3P39023 LINC01960-201ENST00000563759 1884 ntBASIC20.89■□□□□ 0.93
RPL3P39023 AC092053.2-201ENST00000640557 1818 ntBASIC20.89■□□□□ 0.93
RPL3P39023 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RPL3P39023 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPL3P39023 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPL3P39023 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RPL3P39023 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RPL3P39023 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.88■□□□□ 0.93
RPL3P39023 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.88■□□□□ 0.93
RPL3P39023 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
RPL3P39023 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPL3P39023 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RPL3P39023 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPL3P39023 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPL3P39023 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPL3P39023 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPL3P39023 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPL3P39023 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RPL3P39023 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPL3P39023 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.87■□□□□ 0.93
RPL3P39023 AL117332.1-201ENST00000622628 974 ntBASIC20.87■□□□□ 0.93
RPL3P39023 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.87■□□□□ 0.93
RPL3P39023 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPL3P39023 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
RPL3P39023 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPL3P39023 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPL3P39023 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPL3P39023 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPL3P39023 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
RPL3P39023 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.86■□□□□ 0.93
RPL3P39023 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.86■□□□□ 0.93
RPL3P39023 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.86■□□□□ 0.93
RPL3P39023 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.86■□□□□ 0.93
RPL3P39023 UNC93B8-201ENST00000511903 705 ntBASIC20.86■□□□□ 0.93
RPL3P39023 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.86■□□□□ 0.93
RPL3P39023 AC241377.3-202ENST00000626088 1088 ntBASIC20.86■□□□□ 0.93
RPL3P39023 AC241585.3-202ENST00000628937 1088 ntBASIC20.86■□□□□ 0.93
RPL3P39023 AC245100.8-202ENST00000629247 1058 ntBASIC20.86■□□□□ 0.93
RPL3P39023 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPL3P39023 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.86■□□□□ 0.93
RPL3P39023 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPL3P39023 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPL3P39023 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
RPL3P39023 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.85■□□□□ 0.93
RPL3P39023 AC139530.1-201ENST00000575312 1977 ntBASIC20.85■□□□□ 0.93
RPL3P39023 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPL3P39023 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPL3P39023 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.85■□□□□ 0.93
RPL3P39023 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.85■□□□□ 0.93
RPL3P39023 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.85■□□□□ 0.93
RPL3P39023 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPL3P39023 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPL3P39023 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPL3P39023 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.85■□□□□ 0.93
RPL3P39023 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPL3P39023 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.84■□□□□ 0.93
RPL3P39023 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms