Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
CDH3P22223 AL136967.2-201ENST00000623968 743 ntBASIC21.48■■□□□ 1.03
CDH3P22223 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH3P22223 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH3P22223 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH3P22223 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH3P22223 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH3P22223 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDH3P22223 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH3P22223 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH3P22223 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH3P22223 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.47■■□□□ 1.03
CDH3P22223 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDH3P22223 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH3P22223 AC008764.7-201ENST00000593779 1081 ntBASIC21.47■■□□□ 1.03
CDH3P22223 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH3P22223 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDH3P22223 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH3P22223 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH3P22223 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH3P22223 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH3P22223 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH3P22223 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDH3P22223 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH3P22223 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH3P22223 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH3P22223 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH3P22223 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH3P22223 AC091305.1-201ENST00000479476 895 ntBASIC21.46■■□□□ 1.03
CDH3P22223 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH3P22223 AC027682.1-201ENST00000562846 899 ntBASIC21.46■■□□□ 1.03
CDH3P22223 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH3P22223 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH3P22223 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH3P22223 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH3P22223 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH3P22223 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDH3P22223 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDH3P22223 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDH3P22223 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH3P22223 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.45■■□□□ 1.02
CDH3P22223 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH3P22223 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
CDH3P22223 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.45■■□□□ 1.02
CDH3P22223 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
CDH3P22223 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 AC079630.1-202ENST00000618127 1840 ntBASIC21.45■■□□□ 1.02
CDH3P22223 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH3P22223 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH3P22223 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDH3P22223 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH3P22223 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDH3P22223 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDH3P22223 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH3P22223 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CDH3P22223 AC133637.1-201ENST00000624115 1537 ntBASIC21.44■■□□□ 1.02
CDH3P22223 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH3P22223 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH3P22223 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CDH3P22223 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.43■■□□□ 1.02
CDH3P22223 MIR935-201ENST00000401179 91 ntBASIC21.43■■□□□ 1.02
CDH3P22223 AC099791.1-201ENST00000416440 715 ntBASIC21.43■■□□□ 1.02
CDH3P22223 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH3P22223 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.43■■□□□ 1.02
CDH3P22223 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.43■■□□□ 1.02
CDH3P22223 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH3P22223 AL499627.2-201ENST00000606283 725 ntBASIC21.43■■□□□ 1.02
CDH3P22223 RASA4CP-201ENST00000424092 1398 ntBASIC21.43■■□□□ 1.02
CDH3P22223 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH3P22223 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH3P22223 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH3P22223 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH3P22223 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH3P22223 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH3P22223 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH3P22223 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH3P22223 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CDH3P22223 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH3P22223 BX842568.3-201ENST00000418104 571 ntBASIC21.42■■□□□ 1.02
CDH3P22223 AC105265.2-201ENST00000467189 838 ntBASIC21.42■■□□□ 1.02
CDH3P22223 CA15P2-201ENST00000611168 834 ntBASIC21.42■■□□□ 1.02
CDH3P22223 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH3P22223 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CDH3P22223 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDH3P22223 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.41■■□□□ 1.02
CDH3P22223 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms