Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.32■□□□□ 0.84
PEPDP12955 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.32■□□□□ 0.84
PEPDP12955 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PEPDP12955 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.32■□□□□ 0.84
PEPDP12955 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEPDP12955 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEPDP12955 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PEPDP12955 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEPDP12955 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEPDP12955 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEPDP12955 AC096631.2-201ENST00000436136 790 ntBASIC20.31■□□□□ 0.84
PEPDP12955 AL139246.5-201ENST00000606645 996 ntBASIC20.31■□□□□ 0.84
PEPDP12955 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.31■□□□□ 0.84
PEPDP12955 AC241377.3-202ENST00000626088 1088 ntBASIC20.31■□□□□ 0.84
PEPDP12955 AC241585.3-202ENST00000628937 1088 ntBASIC20.31■□□□□ 0.84
PEPDP12955 AC245100.8-202ENST00000629247 1058 ntBASIC20.31■□□□□ 0.84
PEPDP12955 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEPDP12955 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEPDP12955 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.31■□□□□ 0.84
PEPDP12955 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEPDP12955 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PEPDP12955 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PEPDP12955 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PEPDP12955 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PEPDP12955 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.3■□□□□ 0.84
PEPDP12955 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
PEPDP12955 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 PKD1P6-201ENST00000343738 4769 ntBASIC20.3■□□□□ 0.84
PEPDP12955 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.3■□□□□ 0.84
PEPDP12955 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEPDP12955 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.29■□□□□ 0.84
PEPDP12955 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.29■□□□□ 0.84
PEPDP12955 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PEPDP12955 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PEPDP12955 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEPDP12955 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEPDP12955 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEPDP12955 AC079630.1-202ENST00000618127 1840 ntBASIC20.28■□□□□ 0.84
PEPDP12955 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEPDP12955 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.28■□□□□ 0.84
PEPDP12955 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.28■□□□□ 0.84
PEPDP12955 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PEPDP12955 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEPDP12955 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEPDP12955 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PEPDP12955 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PEPDP12955 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PEPDP12955 UNC93B3-201ENST00000308076 687 ntBASIC20.27■□□□□ 0.84
PEPDP12955 AC099791.2-201ENST00000605725 427 ntBASIC20.27■□□□□ 0.84
PEPDP12955 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEPDP12955 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEPDP12955 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.27■□□□□ 0.83
PEPDP12955 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PEPDP12955 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
PEPDP12955 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.27■□□□□ 0.83
PEPDP12955 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PEPDP12955 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEPDP12955 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PEPDP12955 SYT6-210ENST00000641643 1587 ntBASIC20.26■□□□□ 0.83
PEPDP12955 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PEPDP12955 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PEPDP12955 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.26■□□□□ 0.83
PEPDP12955 AC110285.6-201ENST00000617652 491 ntBASIC20.26■□□□□ 0.83
PEPDP12955 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.26■□□□□ 0.83
PEPDP12955 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PEPDP12955 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEPDP12955 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEPDP12955 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PEPDP12955 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.26■□□□□ 0.83
PEPDP12955 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.25■□□□□ 0.83
PEPDP12955 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEPDP12955 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEPDP12955 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PEPDP12955 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
PEPDP12955 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PEPDP12955 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PEPDP12955 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.25■□□□□ 0.83
PEPDP12955 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PEPDP12955 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms