Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.21■□□□□ 0.83
SMIM18P0DKX4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 Z98882.1-201ENST00000622160 2253 ntBASIC20.2■□□□□ 0.82
SMIM18P0DKX4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.2■□□□□ 0.82
SMIM18P0DKX4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 PKD1P6-201ENST00000343738 4769 ntBASIC20.19■□□□□ 0.82
SMIM18P0DKX4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 ALDH1A3-203ENST00000557963 1670 ntBASIC20.19■□□□□ 0.82
SMIM18P0DKX4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMIM18P0DKX4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 AC025884.2-201ENST00000553429 711 ntBASIC20.18■□□□□ 0.82
SMIM18P0DKX4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMIM18P0DKX4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 AC126177.7-201ENST00000547904 679 ntBASIC20.17■□□□□ 0.82
SMIM18P0DKX4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM18P0DKX4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM18P0DKX4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM18P0DKX4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMIM18P0DKX4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMIM18P0DKX4 AL353803.4-201ENST00000565882 1934 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms