Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPSAP08865 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPSAP08865 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.2■□□□□ 0.98
RPSAP08865 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPSAP08865 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPSAP08865 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.19■□□□□ 0.98
RPSAP08865 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPSAP08865 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.19■□□□□ 0.98
RPSAP08865 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPSAP08865 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPSAP08865 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
RPSAP08865 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPSAP08865 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RPSAP08865 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
RPSAP08865 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPSAP08865 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RPSAP08865 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.18■□□□□ 0.98
RPSAP08865 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L13-201ENST00000554103 1267 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L15-201ENST00000611059 1267 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L23-201ENST00000615195 1269 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L24-201ENST00000617576 1269 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L22-201ENST00000618238 1269 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L20-201ENST00000619712 1269 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L21-201ENST00000622058 1269 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L10-201ENST00000622460 1267 ntBASIC21.18■□□□□ 0.98
RPSAP08865 DUX4L25-201ENST00000624915 1269 ntBASIC21.18■□□□□ 0.98
RPSAP08865 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RPSAP08865 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.18■□□□□ 0.98
RPSAP08865 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RPSAP08865 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.18■□□□□ 0.98
RPSAP08865 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RPSAP08865 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPSAP08865 AL020996.1-203ENST00000536896 2307 ntBASIC21.17■□□□□ 0.98
RPSAP08865 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.17■□□□□ 0.98
RPSAP08865 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.17■□□□□ 0.98
RPSAP08865 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.17■□□□□ 0.98
RPSAP08865 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.17■□□□□ 0.98
RPSAP08865 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RPSAP08865 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPSAP08865 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPSAP08865 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPSAP08865 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPSAP08865 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPSAP08865 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPSAP08865 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RPSAP08865 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.16■□□□□ 0.98
RPSAP08865 AC087289.5-201ENST00000586076 3175 ntBASIC21.16■□□□□ 0.98
RPSAP08865 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.16■□□□□ 0.98
RPSAP08865 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPSAP08865 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RPSAP08865 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
RPSAP08865 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 AC079630.1-202ENST00000618127 1840 ntBASIC21.15■□□□□ 0.98
RPSAP08865 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RPSAP08865 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPSAP08865 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPSAP08865 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RPSAP08865 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
RPSAP08865 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPSAP08865 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPSAP08865 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPSAP08865 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.14■□□□□ 0.97
RPSAP08865 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPSAP08865 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPSAP08865 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.13■□□□□ 0.97
RPSAP08865 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPSAP08865 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPSAP08865 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms