Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSBP07858 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.03■□□□□ 0.96
CTSBP07858 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.03■□□□□ 0.96
CTSBP07858 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSBP07858 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.03■□□□□ 0.96
CTSBP07858 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSBP07858 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSBP07858 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSBP07858 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CTSBP07858 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSBP07858 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSBP07858 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSBP07858 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSBP07858 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.02■□□□□ 0.96
CTSBP07858 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSBP07858 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CTSBP07858 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSBP07858 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CTSBP07858 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSBP07858 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSBP07858 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSBP07858 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSBP07858 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
CTSBP07858 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.02■□□□□ 0.95
CTSBP07858 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTSBP07858 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSBP07858 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.01■□□□□ 0.95
CTSBP07858 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSBP07858 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSBP07858 IGHV3-19-201ENST00000521488 291 ntBASIC21.01■□□□□ 0.95
CTSBP07858 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTSBP07858 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSBP07858 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSBP07858 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSBP07858 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21■□□□□ 0.95
CTSBP07858 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21■□□□□ 0.95
CTSBP07858 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSBP07858 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CTSBP07858 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21■□□□□ 0.95
CTSBP07858 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21■□□□□ 0.95
CTSBP07858 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CTSBP07858 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.99■□□□□ 0.95
CTSBP07858 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSBP07858 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSBP07858 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSBP07858 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CTSBP07858 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CTSBP07858 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CTSBP07858 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSBP07858 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSBP07858 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CTSBP07858 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSBP07858 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSBP07858 DUSP8P3-201ENST00000399571 1760 ntBASIC20.98■□□□□ 0.95
CTSBP07858 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSBP07858 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSBP07858 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.98■□□□□ 0.95
CTSBP07858 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSBP07858 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSBP07858 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSBP07858 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
CTSBP07858 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSBP07858 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTSBP07858 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSBP07858 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSBP07858 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTSBP07858 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSBP07858 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSBP07858 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTSBP07858 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.96■□□□□ 0.95
CTSBP07858 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.96■□□□□ 0.95
CTSBP07858 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.96■□□□□ 0.95
CTSBP07858 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.96■□□□□ 0.95
CTSBP07858 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.96■□□□□ 0.95
CTSBP07858 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.96■□□□□ 0.95
CTSBP07858 MIR6084-201ENST00000622012 110 ntBASIC20.96■□□□□ 0.95
CTSBP07858 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSBP07858 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.96■□□□□ 0.95
CTSBP07858 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSBP07858 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTSBP07858 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSBP07858 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CTSBP07858 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.95■□□□□ 0.94
CTSBP07858 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms