Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 C1orf229-201ENST00000623686 2258 ntBASIC19.4■□□□□ 0.7
APOC1P02654 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC1P02654 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOC1P02654 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 AC009299.2-201ENST00000482477 511 ntBASIC19.39■□□□□ 0.69
APOC1P02654 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC1P02654 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APOC1P02654 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOC1P02654 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
APOC1P02654 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.38■□□□□ 0.69
APOC1P02654 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.38■□□□□ 0.69
APOC1P02654 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
APOC1P02654 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
APOC1P02654 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.38■□□□□ 0.69
APOC1P02654 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
APOC1P02654 AC009086.3-201ENST00000623486 1008 ntBASIC19.38■□□□□ 0.69
APOC1P02654 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOC1P02654 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
APOC1P02654 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC1P02654 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
APOC1P02654 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
APOC1P02654 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC1P02654 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APOC1P02654 DUX4L4-201ENST00000566884 1269 ntBASIC19.37■□□□□ 0.69
APOC1P02654 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC1P02654 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.37■□□□□ 0.69
APOC1P02654 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
APOC1P02654 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC1P02654 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
APOC1P02654 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.36■□□□□ 0.69
APOC1P02654 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOC1P02654 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
APOC1P02654 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOC1P02654 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOC1P02654 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
APOC1P02654 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
APOC1P02654 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.35■□□□□ 0.69
APOC1P02654 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.35■□□□□ 0.69
APOC1P02654 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.35■□□□□ 0.69
APOC1P02654 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.35■□□□□ 0.69
APOC1P02654 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC1P02654 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.34■□□□□ 0.69
APOC1P02654 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
APOC1P02654 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.34■□□□□ 0.69
APOC1P02654 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
APOC1P02654 TSPY9P-201ENST00000440215 945 ntBASIC19.34■□□□□ 0.69
APOC1P02654 TSPY11P-201ENST00000442607 1045 ntBASIC19.34■□□□□ 0.69
APOC1P02654 AL451085.2-201ENST00000605085 799 ntBASIC19.34■□□□□ 0.69
APOC1P02654 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.34■□□□□ 0.69
APOC1P02654 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.34■□□□□ 0.69
APOC1P02654 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC1P02654 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
APOC1P02654 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOC1P02654 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APOC1P02654 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.33■□□□□ 0.69
APOC1P02654 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
APOC1P02654 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOC1P02654 MIR6724-1-201ENST00000616420 92 ntBASIC19.33■□□□□ 0.68
APOC1P02654 MIR6724-2-201ENST00000616483 92 ntBASIC19.33■□□□□ 0.68
APOC1P02654 MIR6724-4-201ENST00000617390 92 ntBASIC19.33■□□□□ 0.68
APOC1P02654 MIR6724-3-201ENST00000622482 92 ntBASIC19.33■□□□□ 0.68
APOC1P02654 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOC1P02654 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOC1P02654 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
APOC1P02654 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOC1P02654 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
APOC1P02654 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
APOC1P02654 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOC1P02654 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOC1P02654 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOC1P02654 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms