Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.21■□□□□ 0.35
TOMM40O96008 FP325331.1-202ENST00000623531 1380 ntBASIC17.21■□□□□ 0.35
TOMM40O96008 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.21■□□□□ 0.35
TOMM40O96008 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TOMM40O96008 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.21■□□□□ 0.35
TOMM40O96008 LINC01529-204ENST00000636474 1715 ntBASIC17.21■□□□□ 0.35
TOMM40O96008 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOMM40O96008 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.21■□□□□ 0.34
TOMM40O96008 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.21■□□□□ 0.34
TOMM40O96008 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
TOMM40O96008 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TOMM40O96008 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TOMM40O96008 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.2■□□□□ 0.34
TOMM40O96008 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.2■□□□□ 0.34
TOMM40O96008 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TOMM40O96008 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
TOMM40O96008 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOMM40O96008 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.2■□□□□ 0.34
TOMM40O96008 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TOMM40O96008 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.19■□□□□ 0.34
TOMM40O96008 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TOMM40O96008 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.19■□□□□ 0.34
TOMM40O96008 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.19■□□□□ 0.34
TOMM40O96008 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.19■□□□□ 0.34
TOMM40O96008 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.19■□□□□ 0.34
TOMM40O96008 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOMM40O96008 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.19■□□□□ 0.34
TOMM40O96008 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.19■□□□□ 0.34
TOMM40O96008 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TOMM40O96008 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TOMM40O96008 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TOMM40O96008 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TOMM40O96008 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TOMM40O96008 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TOMM40O96008 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TOMM40O96008 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOMM40O96008 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.18■□□□□ 0.34
TOMM40O96008 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TOMM40O96008 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TOMM40O96008 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOMM40O96008 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TOMM40O96008 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.17■□□□□ 0.34
TOMM40O96008 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOMM40O96008 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOMM40O96008 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.17■□□□□ 0.34
TOMM40O96008 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.17■□□□□ 0.34
TOMM40O96008 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.17■□□□□ 0.34
TOMM40O96008 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.17■□□□□ 0.34
TOMM40O96008 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOMM40O96008 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOMM40O96008 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOMM40O96008 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.17■□□□□ 0.34
TOMM40O96008 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TOMM40O96008 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TOMM40O96008 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TOMM40O96008 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.16■□□□□ 0.34
TOMM40O96008 KRT125P-201ENST00000546827 989 ntBASIC17.16■□□□□ 0.34
TOMM40O96008 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 AC092028.1-203ENST00000608262 953 ntBASIC17.16■□□□□ 0.34
TOMM40O96008 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TOMM40O96008 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TOMM40O96008 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms