Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN1O95832 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN1O95832 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN1O95832 AC022211.4-201ENST00000625094 2161 ntBASIC19.66■□□□□ 0.74
CLDN1O95832 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN1O95832 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN1O95832 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN1O95832 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN1O95832 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN1O95832 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN1O95832 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN1O95832 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN1O95832 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CLDN1O95832 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN1O95832 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN1O95832 AP004607.4-201ENST00000530158 1459 ntBASIC19.65■□□□□ 0.74
CLDN1O95832 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN1O95832 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN1O95832 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN1O95832 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN1O95832 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.64■□□□□ 0.74
CLDN1O95832 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN1O95832 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN1O95832 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN1O95832 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN1O95832 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.64■□□□□ 0.73
CLDN1O95832 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN1O95832 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN1O95832 AC004854.2-201ENST00000608450 1441 ntBASIC19.64■□□□□ 0.73
CLDN1O95832 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN1O95832 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN1O95832 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN1O95832 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN1O95832 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN1O95832 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN1O95832 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CLDN1O95832 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN1O95832 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN1O95832 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN1O95832 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN1O95832 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.63■□□□□ 0.73
CLDN1O95832 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN1O95832 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN1O95832 AC142086.2-201ENST00000569753 217 ntBASIC19.63■□□□□ 0.73
CLDN1O95832 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN1O95832 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN1O95832 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN1O95832 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN1O95832 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.62■□□□□ 0.73
CLDN1O95832 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.62■□□□□ 0.73
CLDN1O95832 AC093827.2-201ENST00000512654 315 ntBASIC19.62■□□□□ 0.73
CLDN1O95832 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN1O95832 KRT18P6-201ENST00000555540 1265 ntBASIC19.62■□□□□ 0.73
CLDN1O95832 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN1O95832 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN1O95832 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CLDN1O95832 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN1O95832 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN1O95832 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLDN1O95832 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.61■□□□□ 0.73
CLDN1O95832 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN1O95832 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN1O95832 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN1O95832 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN1O95832 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN1O95832 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN1O95832 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN1O95832 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN1O95832 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLDN1O95832 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN1O95832 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN1O95832 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN1O95832 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN1O95832 MIR4651-201ENST00000582622 73 ntBASIC19.6■□□□□ 0.73
CLDN1O95832 AC011767.1-201ENST00000617410 1153 ntBASIC19.6■□□□□ 0.73
CLDN1O95832 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN1O95832 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN1O95832 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms