Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE6O95741 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CPNE6O95741 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.61■■□□□ 1.05
CPNE6O95741 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE6O95741 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE6O95741 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE6O95741 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.61■■□□□ 1.05
CPNE6O95741 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE6O95741 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE6O95741 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE6O95741 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE6O95741 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CPNE6O95741 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE6O95741 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPNE6O95741 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.59■■□□□ 1.05
CPNE6O95741 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.59■■□□□ 1.05
CPNE6O95741 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 SLC47A1P1-202ENST00000449666 945 ntBASIC21.59■■□□□ 1.05
CPNE6O95741 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPNE6O95741 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.59■■□□□ 1.05
CPNE6O95741 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE6O95741 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE6O95741 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE6O95741 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CPNE6O95741 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.58■■□□□ 1.05
CPNE6O95741 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CPNE6O95741 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE6O95741 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE6O95741 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE6O95741 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.58■■□□□ 1.04
CPNE6O95741 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE6O95741 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CPNE6O95741 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE6O95741 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.57■■□□□ 1.04
CPNE6O95741 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CPNE6O95741 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE6O95741 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CPNE6O95741 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.57■■□□□ 1.04
CPNE6O95741 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE6O95741 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE6O95741 AC133637.1-201ENST00000624115 1537 ntBASIC21.57■■□□□ 1.04
CPNE6O95741 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.57■■□□□ 1.04
CPNE6O95741 AL162430.1-201ENST00000480705 870 ntBASIC21.57■■□□□ 1.04
CPNE6O95741 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.57■■□□□ 1.04
CPNE6O95741 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CPNE6O95741 FP325331.1-202ENST00000623531 1380 ntBASIC21.57■■□□□ 1.04
CPNE6O95741 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE6O95741 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE6O95741 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CPNE6O95741 TSPY26P-201ENST00000476365 1326 ntBASIC21.56■■□□□ 1.04
CPNE6O95741 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CPNE6O95741 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE6O95741 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE6O95741 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE6O95741 AC004812.2-201ENST00000611079 2094 ntBASIC21.56■■□□□ 1.04
CPNE6O95741 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE6O95741 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.56■■□□□ 1.04
CPNE6O95741 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.56■■□□□ 1.04
CPNE6O95741 AL499627.2-201ENST00000606283 725 ntBASIC21.56■■□□□ 1.04
CPNE6O95741 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.56■■□□□ 1.04
CPNE6O95741 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE6O95741 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE6O95741 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CPNE6O95741 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE6O95741 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CPNE6O95741 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE6O95741 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CPNE6O95741 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE6O95741 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE6O95741 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CPNE6O95741 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE6O95741 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE6O95741 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.55■■□□□ 1.04
CPNE6O95741 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE6O95741 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
CPNE6O95741 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE6O95741 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE6O95741 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE6O95741 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE6O95741 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE6O95741 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.54■■□□□ 1.04
CPNE6O95741 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CPNE6O95741 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CPNE6O95741 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.53■■□□□ 1.04
CPNE6O95741 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CPNE6O95741 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.53■■□□□ 1.04
CPNE6O95741 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.53■■□□□ 1.04
CPNE6O95741 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.53■■□□□ 1.04
CPNE6O95741 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE6O95741 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms