Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.4■□□□□ 0.54
NDUFB3O43676 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFB3O43676 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
NDUFB3O43676 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFB3O43676 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
NDUFB3O43676 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NDUFB3O43676 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFB3O43676 MIR4767-201ENST00000582827 78 ntBASIC18.39■□□□□ 0.53
NDUFB3O43676 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFB3O43676 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.39■□□□□ 0.53
NDUFB3O43676 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFB3O43676 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFB3O43676 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDUFB3O43676 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NDUFB3O43676 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFB3O43676 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFB3O43676 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.38■□□□□ 0.53
NDUFB3O43676 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFB3O43676 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFB3O43676 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDUFB3O43676 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFB3O43676 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.37■□□□□ 0.53
NDUFB3O43676 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.37■□□□□ 0.53
NDUFB3O43676 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.37■□□□□ 0.53
NDUFB3O43676 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFB3O43676 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFB3O43676 EDA-201ENST00000338901 1233 ntBASIC18.36■□□□□ 0.53
NDUFB3O43676 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFB3O43676 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.36■□□□□ 0.53
NDUFB3O43676 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFB3O43676 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFB3O43676 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.36■□□□□ 0.53
NDUFB3O43676 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFB3O43676 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.36■□□□□ 0.53
NDUFB3O43676 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.36■□□□□ 0.53
NDUFB3O43676 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NDUFB3O43676 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.36■□□□□ 0.53
NDUFB3O43676 AC133561.4-201ENST00000566112 224 ntBASIC18.36■□□□□ 0.53
NDUFB3O43676 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.36■□□□□ 0.53
NDUFB3O43676 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFB3O43676 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.35■□□□□ 0.53
NDUFB3O43676 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NDUFB3O43676 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NDUFB3O43676 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.35■□□□□ 0.53
NDUFB3O43676 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.35■□□□□ 0.53
NDUFB3O43676 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NDUFB3O43676 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.35■□□□□ 0.53
NDUFB3O43676 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFB3O43676 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFB3O43676 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NDUFB3O43676 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.34■□□□□ 0.53
NDUFB3O43676 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
NDUFB3O43676 AL355001.2-201ENST00000620617 1191 ntBASIC18.34■□□□□ 0.53
NDUFB3O43676 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFB3O43676 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.34■□□□□ 0.53
NDUFB3O43676 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFB3O43676 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFB3O43676 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
NDUFB3O43676 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.33■□□□□ 0.53
NDUFB3O43676 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.33■□□□□ 0.53
NDUFB3O43676 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFB3O43676 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
NDUFB3O43676 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.33■□□□□ 0.53
NDUFB3O43676 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.33■□□□□ 0.52
NDUFB3O43676 OR2I1P-207ENST00000453522 948 ntBASIC18.33■□□□□ 0.52
NDUFB3O43676 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
NDUFB3O43676 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.33■□□□□ 0.52
NDUFB3O43676 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFB3O43676 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms