Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TO15178 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.35■□□□□ 0.85
TO15178 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.35■□□□□ 0.85
TO15178 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.35■□□□□ 0.85
TO15178 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TO15178 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TO15178 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.35■□□□□ 0.85
TO15178 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.35■□□□□ 0.85
TO15178 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
TO15178 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TO15178 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
TO15178 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.34■□□□□ 0.85
TO15178 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.34■□□□□ 0.85
TO15178 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.34■□□□□ 0.85
TO15178 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TO15178 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.34■□□□□ 0.85
TO15178 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.34■□□□□ 0.85
TO15178 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.34■□□□□ 0.85
TO15178 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TO15178 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.34■□□□□ 0.85
TO15178 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TO15178 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TO15178 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TO15178 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
TO15178 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TO15178 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TO15178 EDA-201ENST00000338901 1233 ntBASIC20.33■□□□□ 0.85
TO15178 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TO15178 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TO15178 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.33■□□□□ 0.84
TO15178 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TO15178 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TO15178 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.32■□□□□ 0.84
TO15178 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TO15178 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TO15178 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TO15178 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.32■□□□□ 0.84
TO15178 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TO15178 BX842568.3-201ENST00000418104 571 ntBASIC20.32■□□□□ 0.84
TO15178 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.32■□□□□ 0.84
TO15178 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.32■□□□□ 0.84
TO15178 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.32■□□□□ 0.84
TO15178 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TO15178 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TO15178 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TO15178 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TO15178 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.31■□□□□ 0.84
TO15178 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TO15178 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.31■□□□□ 0.84
TO15178 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
TO15178 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.31■□□□□ 0.84
TO15178 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.31■□□□□ 0.84
TO15178 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TO15178 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TO15178 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.3■□□□□ 0.84
TO15178 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TO15178 AL355001.2-201ENST00000620617 1191 ntBASIC20.3■□□□□ 0.84
TO15178 AL031602.1-201ENST00000633169 911 ntBASIC20.3■□□□□ 0.84
TO15178 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TO15178 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.3■□□□□ 0.84
TO15178 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TO15178 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TO15178 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.29■□□□□ 0.84
TO15178 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TO15178 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TO15178 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
TO15178 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TO15178 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.29■□□□□ 0.84
TO15178 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.29■□□□□ 0.84
TO15178 SLC47A1P1-202ENST00000449666 945 ntBASIC20.29■□□□□ 0.84
TO15178 AL031432.3-201ENST00000607698 485 ntBASIC20.29■□□□□ 0.84
TO15178 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TO15178 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TO15178 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TO15178 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TO15178 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TO15178 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TO15178 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.29■□□□□ 0.84
TO15178 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TO15178 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TO15178 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TO15178 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.29■□□□□ 0.84
TO15178 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TO15178 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TO15178 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TO15178 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TO15178 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TO15178 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.28■□□□□ 0.84
TO15178 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms