Protein–RNA interactions for Protein: A0A1B0GTU2

CTXND1, Cortexin domain-containing 1, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTXND1A0A1B0GTU2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTXND1A0A1B0GTU2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTXND1A0A1B0GTU2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTXND1A0A1B0GTU2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTXND1A0A1B0GTU2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.35■□□□□ 0.37
CTXND1A0A1B0GTU2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTXND1A0A1B0GTU2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTXND1A0A1B0GTU2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.34■□□□□ 0.37
CTXND1A0A1B0GTU2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.34■□□□□ 0.37
CTXND1A0A1B0GTU2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTXND1A0A1B0GTU2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTXND1A0A1B0GTU2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTXND1A0A1B0GTU2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTXND1A0A1B0GTU2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTXND1A0A1B0GTU2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTXND1A0A1B0GTU2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.33■□□□□ 0.36
CTXND1A0A1B0GTU2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 AC005229.4-201ENST00000610085 2198 ntBASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 RPS2P7-201ENST00000447334 885 ntBASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTXND1A0A1B0GTU2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.31■□□□□ 0.36
CTXND1A0A1B0GTU2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTXND1A0A1B0GTU2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 AC016575.1-201ENST00000607026 382 ntBASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTXND1A0A1B0GTU2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTXND1A0A1B0GTU2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms