Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 MIR762HG-202ENST00000565573 1125 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC009093.3-201ENST00000567688 351 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AP000902.1-201ENST00000578806 368 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 ZNF667-AS1-203ENST00000586822 468 ntTSL 2 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 Metazoa_SRP.185-201ENST00000615776 260 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 LINC02002-201ENST00000578977 1481 ntTSL 2 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 AL358075.4-201ENST00000540385 1553 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 AC016397.2-201ENST00000624848 1985 ntBASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 GTF2H2-202ENST00000330280 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 AC012368.1-206ENST00000451350 1504 ntTSL 5 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 LINC01033-201ENST00000504609 735 ntTSL 5 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 AC005531.1-201ENST00000520729 1360 ntBASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 RN7SL431P-201ENST00000582918 305 ntBASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 GGNBP1-203ENST00000612409 592 ntTSL 5 BASIC19.61■□□□□ 0.73
RIMBP3Q9UFD9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 DGCR9-201ENST00000609630 2415 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 TSEN2P1-201ENST00000513552 1387 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 PPP1R2P1-210ENST00000429032 618 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 TAS2R62P-201ENST00000433466 940 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 AL135924.1-201ENST00000446146 423 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 AC132938.1-201ENST00000566971 360 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 AP005264.2-201ENST00000586747 732 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 STAG3L3-206ENST00000608210 1067 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 OR13I1P-201ENST00000609811 1264 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 TPRXL-213ENST00000636198 651 ntBASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC19.6■□□□□ 0.73
RIMBP3Q9UFD9 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 KRTAP2-1-201ENST00000391419 776 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 AC130710.1-201ENST00000412381 642 ntTSL 3 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 MT1DP-202ENST00000486551 150 ntBASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 CD3E-204ENST00000528600 1289 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 AC136475.5-201ENST00000534483 827 ntTSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 AC100836.1-201ENST00000557426 877 ntTSL 3 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 AC006272.1-201ENST00000596964 552 ntTSL 4 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 FAM47E-203ENST00000510197 1624 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIMBP3Q9UFD9 AL021707.2-203ENST00000444381 1325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 ZNF483-202ENST00000355824 1239 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RIMBP3Q9UFD9 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms