Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 Z97653.2-201ENST00000623057 1418 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 RHOC-205ENST00000369636 786 ntTSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 CFL1P6-201ENST00000400899 494 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 LINC00634-202ENST00000505157 222 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AC093826.1-201ENST00000508655 993 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 FAM213AP2-201ENST00000521579 683 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AC026304.1-201ENST00000597953 561 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 C2orf27AP1-201ENST00000618128 586 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AC073869.4-201ENST00000620841 800 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 CICP9-201ENST00000444451 1913 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.97□□□□□ -0.49
PARPBPQ9NWS1 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AC005154.3-201ENST00000419639 1393 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms