Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC239868.1-201ENST00000369385 493 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 AL627389.1-201ENST00000413508 1182 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC9.87□□□□□ -0.83
NACAE9PAV3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC9.87□□□□□ -0.83
NACAE9PAV3 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
NACAE9PAV3 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 AGGF1P10-201ENST00000635005 2191 ntBASIC9.87□□□□□ -0.83
NACAE9PAV3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
NACAE9PAV3 ZER1-201ENST00000291900 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 CES1P1-201ENST00000421606 1704 ntBASIC9.86□□□□□ -0.83
NACAE9PAV3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
NACAE9PAV3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC9.86□□□□□ -0.83
NACAE9PAV3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 CHCHD2P9-201ENST00000461726 456 ntBASIC9.86□□□□□ -0.83
NACAE9PAV3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC9.86□□□□□ -0.83
NACAE9PAV3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC9.86□□□□□ -0.83
NACAE9PAV3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 AC011491.1-203ENST00000637688 543 ntBASIC9.86□□□□□ -0.83
NACAE9PAV3 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC9.86□□□□□ -0.83
NACAE9PAV3 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 AC106818.1-201ENST00000623223 3242 ntBASIC9.86□□□□□ -0.83
NACAE9PAV3 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
NACAE9PAV3 POM121L14P-201ENST00000406100 1558 ntBASIC9.86□□□□□ -0.83
NACAE9PAV3 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 CICP9-201ENST00000444451 1913 ntBASIC9.86□□□□□ -0.83
NACAE9PAV3 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC9.86□□□□□ -0.83
NACAE9PAV3 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
NACAE9PAV3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC9.86□□□□□ -0.83
NACAE9PAV3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC9.86□□□□□ -0.83
NACAE9PAV3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC9.86□□□□□ -0.83
NACAE9PAV3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC9.86□□□□□ -0.83
NACAE9PAV3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms