Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC024884.2-201ENST00000610448 1247 ntBASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AL512383.1-201ENST00000624175 2677 ntBASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 ELOVL3-201ENST00000370005 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 KATNAL2-202ENST00000356157 1635 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 FAM238B-203ENST00000434458 880 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AC009171.2-201ENST00000573220 318 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AC092327.1-201ENST00000596612 744 ntBASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 FAM236A-202ENST00000611003 403 ntAPPRIS P5 TSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 FAM49B-220ENST00000522250 1647 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SOX5-204ENST00000441133 638 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 RN7SL164P-201ENST00000482613 303 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 BIN3-210ENST00000522268 321 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 CLPP-204ENST00000596149 745 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 TRMT112P6-201ENST00000599234 372 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AL009178.2-201ENST00000597278 2719 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 TAC4-204ENST00000398154 624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AL390726.1-201ENST00000451357 202 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 HP-215ENST00000569639 568 ntTSL 4 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC127496.2-201ENST00000576859 368 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC006547.1-207ENST00000601746 930 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC006547.1-210ENST00000609644 589 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 MYO5BP1-201ENST00000610994 1239 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AC012486.1-201ENST00000625143 216 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 PRSS2-204ENST00000632805 807 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 KIAA1024L-201ENST00000564719 2354 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 TMOD4-201ENST00000295314 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 IGHVII-65-1-201ENST00000519992 302 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AP001972.4-201ENST00000530550 560 ntTSL 4 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 MIR3689A-201ENST00000578854 78 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 RN7SL217P-201ENST00000584520 286 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 HKR1-206ENST00000586897 510 ntTSL 4 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AKR1B1P7-201ENST00000587229 952 ntBASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 PASK-216ENST00000629419 216 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
VPS13DQ5THJ4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms