Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 TRIM80P-201ENST00000455685 2848 ntBASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 ASS1P2-201ENST00000439895 1223 ntBASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 AC008267.1-201ENST00000474858 1069 ntBASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 SPCS2P2-201ENST00000603270 608 ntBASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 HLA-C-210ENST00000640219 976 ntBASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB9F8W1W9 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 KRT8P38-201ENST00000441370 1430 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AC011477.7-201ENST00000617163 1440 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 PMF1-201ENST00000368273 884 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 HLA-DMA-202ENST00000395303 1007 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 RPL13AP19-201ENST00000434320 584 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AC012362.1-201ENST00000434906 739 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AC015818.1-201ENST00000451011 244 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AC104784.1-201ENST00000473096 294 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 FAM86B3P-203ENST00000523992 854 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AC091304.3-201ENST00000566500 716 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 MIR4722-201ENST00000578292 60 ntBASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB9F8W1W9 AL132780.4-201ENST00000624870 1135 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms