Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SLC16A7-216ENST00000552432 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC120114.4-201ENST00000623731 2194 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SUCLG2P2-201ENST00000307241 1296 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AL590068.2-201ENST00000426067 378 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 OR7E26P-201ENST00000502808 1006 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AP001922.3-201ENST00000524768 842 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 GLTP-205ENST00000544393 914 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RPL23-207ENST00000577407 615 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC008013.1-201ENST00000612219 629 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC099804.1-201ENST00000623105 714 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 LINC01651-201ENST00000624642 350 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 FP671120.4-201ENST00000629969 923 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC020658.7-201ENST00000624274 2442 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SP100-203ENST00000409112 2198 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 OTUD6B-AS1-202ENST00000524003 2171 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AREG-201ENST00000395748 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RN7SL674P-201ENST00000463397 275 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 KRT19P3-201ENST00000507547 828 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC090376.1-202ENST00000587276 470 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RN7SL1-201ENST00000618786 299 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC099063.4-201ENST00000641099 1602 ntBASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 SSR4P1-201ENST00000415143 412 ntBASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 OR10AA1P-201ENST00000417823 937 ntBASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 PSCA-204ENST00000513264 551 ntAPPRIS ALT2 TSL 4 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 AP000812.3-201ENST00000544535 609 ntBASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS13DQ5THJ4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 MYCNOS-202ENST00000641263 1313 ntBASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 LY6D-201ENST00000301263 804 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 CCL26-202ENST00000394905 703 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AC112492.3-201ENST00000457557 1031 ntBASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 RN7SL771P-201ENST00000482328 298 ntBASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AC091114.1-202ENST00000521991 785 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS13DQ5THJ4 AC023509.4-201ENST00000602306 775 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms