Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC13.46□□□□□ -0.25
KDELR3O43731 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.46□□□□□ -0.25
KDELR3O43731 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
KDELR3O43731 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.46□□□□□ -0.26
KDELR3O43731 MAX-212ENST00000555932 1673 ntTSL 5 BASIC13.46□□□□□ -0.26
KDELR3O43731 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
KDELR3O43731 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
KDELR3O43731 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.26
KDELR3O43731 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC13.46□□□□□ -0.26
KDELR3O43731 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
KDELR3O43731 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
KDELR3O43731 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.46□□□□□ -0.26
KDELR3O43731 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
KDELR3O43731 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.46□□□□□ -0.26
KDELR3O43731 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC13.45□□□□□ -0.26
KDELR3O43731 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
KDELR3O43731 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 NUTM2HP-201ENST00000442076 2498 ntBASIC13.45□□□□□ -0.26
KDELR3O43731 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC13.45□□□□□ -0.26
KDELR3O43731 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
KDELR3O43731 AC004522.1-201ENST00000419978 654 ntBASIC13.45□□□□□ -0.26
KDELR3O43731 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.45□□□□□ -0.26
KDELR3O43731 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.45□□□□□ -0.26
KDELR3O43731 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.45□□□□□ -0.26
KDELR3O43731 AC010202.1-201ENST00000551181 405 ntBASIC13.45□□□□□ -0.26
KDELR3O43731 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC13.45□□□□□ -0.26
KDELR3O43731 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.45□□□□□ -0.26
KDELR3O43731 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 LINC00563-201ENST00000566370 1400 ntBASIC13.45□□□□□ -0.26
KDELR3O43731 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC13.45□□□□□ -0.26
KDELR3O43731 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
KDELR3O43731 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.45□□□□□ -0.26
KDELR3O43731 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
KDELR3O43731 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
KDELR3O43731 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 AC022364.1-202ENST00000617468 2409 ntBASIC13.44□□□□□ -0.26
KDELR3O43731 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 JAML-211ENST00000533261 1508 ntTSL 5 BASIC13.44□□□□□ -0.26
KDELR3O43731 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.44□□□□□ -0.26
KDELR3O43731 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
KDELR3O43731 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC13.44□□□□□ -0.26
KDELR3O43731 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.44□□□□□ -0.26
KDELR3O43731 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 MIPEPP1-201ENST00000413533 2027 ntBASIC13.44□□□□□ -0.26
KDELR3O43731 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
KDELR3O43731 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.44□□□□□ -0.26
KDELR3O43731 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 CLUHP8-201ENST00000547527 1485 ntBASIC13.44□□□□□ -0.26
KDELR3O43731 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.44□□□□□ -0.26
KDELR3O43731 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 CICP8-201ENST00000455800 2813 ntBASIC13.44□□□□□ -0.26
KDELR3O43731 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
KDELR3O43731 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms