Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 DCAKD-202ENST00000342350 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 HLA-U-204ENST00000418981 186 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 HNRNPA1P49-201ENST00000421336 904 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC072022.2-201ENST00000449623 672 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 RN7SL304P-201ENST00000488028 301 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 LYPLA1P2-201ENST00000513113 691 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 ALG1L13P-201ENST00000518201 521 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 Metazoa_SRP.59-201ENST00000621376 277 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 APP-205ENST00000358918 2366 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC012184.3-201ENST00000562077 1471 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AL356585.2-201ENST00000625078 2396 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 PPM1N-204ENST00000401593 548 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 ATXN8OS-201ENST00000414504 1148 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 RN7SL833P-201ENST00000498758 284 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 FAXDC2-205ENST00000517938 1203 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 IFT74-201ENST00000380062 2160 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AL357055.2-201ENST00000412567 434 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 DANT1-202ENST00000451869 444 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RN7SL614P-201ENST00000461850 280 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RN7SL265P-201ENST00000486808 300 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 PKMP4-201ENST00000523134 306 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 NOP16-210ENST00000619979 963 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC009927.1-201ENST00000510501 1779 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC133919.3-201ENST00000621407 1804 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 S100A1-203ENST00000368698 784 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CD72-203ENST00000378431 849 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AL355994.4-201ENST00000416882 563 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AL354676.1-201ENST00000458047 368 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 IGKV2D-24-201ENST00000462693 390 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 IGKV2-24-201ENST00000484817 390 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 MIR4687-201ENST00000583618 80 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 MIR4761-201ENST00000585066 82 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 LINC00664-201ENST00000596203 1742 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 AC073548.1-201ENST00000624088 1882 ntBASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 PARPBP-210ENST00000541394 2452 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS13DQ5THJ4 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms