Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 AL627231.1-201ENST00000394467 1125 ntBASIC14.37□□□□□ -0.11
SSR1P43307 AC092573.1-201ENST00000433054 884 ntBASIC14.37□□□□□ -0.11
SSR1P43307 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.37□□□□□ -0.11
SSR1P43307 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.37□□□□□ -0.11
SSR1P43307 NUP210P1-202ENST00000504322 710 ntBASIC14.37□□□□□ -0.11
SSR1P43307 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.37□□□□□ -0.11
SSR1P43307 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.37□□□□□ -0.11
SSR1P43307 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.37□□□□□ -0.11
SSR1P43307 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.37□□□□□ -0.11
SSR1P43307 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 AC012044.1-201ENST00000603431 297 ntBASIC14.37□□□□□ -0.11
SSR1P43307 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 TBC1D3J-201ENST00000620719 1426 ntBASIC14.37□□□□□ -0.11
SSR1P43307 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.37□□□□□ -0.11
SSR1P43307 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SSR1P43307 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SSR1P43307 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 AGGF1P10-201ENST00000635005 2191 ntBASIC14.36□□□□□ -0.11
SSR1P43307 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SSR1P43307 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.36□□□□□ -0.11
SSR1P43307 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.36□□□□□ -0.11
SSR1P43307 MIR4754-201ENST00000582477 89 ntBASIC14.36□□□□□ -0.11
SSR1P43307 AP005264.5-201ENST00000590066 467 ntBASIC14.36□□□□□ -0.11
SSR1P43307 SIGLEC18P-201ENST00000602271 909 ntBASIC14.36□□□□□ -0.11
SSR1P43307 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.36□□□□□ -0.11
SSR1P43307 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.36□□□□□ -0.11
SSR1P43307 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SSR1P43307 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSR1P43307 IL9RP3-201ENST00000442856 1674 ntBASIC14.36□□□□□ -0.11
SSR1P43307 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.36□□□□□ -0.11
SSR1P43307 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SSR1P43307 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SSR1P43307 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms