Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NCDNQ9UBB6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 PTENP1-202ENST00000532280 3996 ntBASIC13.24□□□□□ -0.29
NCDNQ9UBB6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AC087386.2-201ENST00000623212 4637 ntBASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AC024475.2-201ENST00000312173 879 ntBASIC13.24□□□□□ -0.29
NCDNQ9UBB6 RNA5SP84-201ENST00000364740 107 ntBASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 RAB42P1-201ENST00000555078 316 ntBASIC13.24□□□□□ -0.29
NCDNQ9UBB6 CALM3-206ENST00000594523 540 ntTSL 4 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AL122018.1-201ENST00000446607 2310 ntBASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NCDNQ9UBB6 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AL356583.3-201ENST00000412354 417 ntBASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 FPGT-205ENST00000482102 561 ntTSL 4 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC13.23□□□□□ -0.29
NCDNQ9UBB6 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms